Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888320.1_cds_XP_016442883.1_38100

CDS Infomation

[gene=LOC107768284] [db_xref=GeneID:107768284] [protein=LOW QUALITY PROTEIN: protein SHOOT GRAVITROPISM 6-like] [exception=unclassified translation discrepancy] [protein_id=XP_016442883.1] [location=join(10441..10480,10588..10678,11386..11440,11545..11676,12645..12678,12681..12715,14248..14338,14431..14526,15960..16038,16132..16195,17941..18044,18256..18361,20896..20985,22182..22259,22540..22607,22689..22788,22882..23058,23221..23310,23454..23519,23707..23805,23907..23981,27497..27556,28690..28779,29234..29355,31174..31303,31428..31507,33606..33741,33945..34026,35310..35455,35637..35717,35792..35892,37604..37842,37917..38026,38145..38273,38474..38548,38624..38757,38880..38952,39124..39255,41106..41287,41373..41495,41604..41664,41761..41856,50392..50492,50836..50941,51301..51414,51494..51568,52167..52265,53370..53441,53516..53601,53674..53767,54821..54928,55018..55200)] [gbkey=CDS]

Sequence

ATGGCGTCTTCCAGTTCCGGCAACTCCGTTCCTGCCGCTGAGGCAGTTCAAGTTCTGGTA
TCTTCATTGGCGGATGATTCACCTATTGTACGTGAAGCATCAATGGCTACTCTCAAGGAC
ATCACTTCCTTAAACCCACTTTTGGTTCTTGATTGTTGCCTAACAGTATCGAGAGGTGGA
CGACGGAGGTTTGGGAATATAGCTGGTTTATTTCAAGTGATGTCAGTGGCAATTCAGGCT
TTGGATAAGGGAGATGTTGATCCTAATTATCTGGCTAAGTTGGCCAAGATTGCCACTTCT
GAGGTGATCTCAACCAAGGAACTTAATGCTGACTGGCAAAGAGCTGCGGCTGGACTTGTA
TCAATTGGTTCACATATGCCTGATCTGATGATGGAAGAAATATTCCTCCATCTTTCAGGG
TCAAATTCTGCTCTGCCAGCCATGGTTCAAATTCTTGCAGTCTTTGCATCATCTGATGCT
TTGCAGTTTACTCCTCACCTTAAGGGTGTACTGGCACGAGTGGTGCCCATTCTTGGAAAT
GTGAGGGACATACACCGGCCTATTTTTGCAAATGCATTCAAATGTTGGTGCCAATCTTGC
TGGCAGTGCAGTGTCGACTTCCCTTTGTCTTCCGTTCTAGATGCTGATATCATGTCTTTC
TTGAATTCGGCATTTGAACTATTATTGAGAGTTTGGGCAATTTCACGGGATCTGAAGGTT
CGCTTATCTTCTGTGGAAGCATTAGGGCAGATGGTTGGTCTTATTACTAGAACGCAGCTG
AAGGCAGCTTTGCCAAGACTTGTTCCAACTATATTGGAACTGTACAAGAGGGATAACGAT
GTGGCCTTTGTAGCAACTTGTAGCCTCCATAATGTATTAAGCGCCTCATTACTTTCAGAA
AGTGGTCCACCATTACTTGATTTTGAGGATCTTACTGTCATATTATCAACACTGCTTCCT
GTGGTTTGTAGGAGCAATGACAAAAAAGAGCATTCAGATTTCTCAGTTGGGCTGAAGACT
TATAATGAAGTTCAGCATTGTTTCCTAACAATTGGTTTGGTGTACCCGGAGGATCTGTTT
GTCTTCCTTCTCAATAAATGCAAGCTGAAAGAAGAACCTCAGGCTGTTGGTGCACTTTGT
GTATTAAAGCATTTGTTACCCAGATTGTCCGAGGCTTGGCATAATAAGAGGCCTTTACTA
ATTGAAGTTGTGAAGCTGTTATTGGATGAGCTTAATTTAGGGGTCTGTAAGGCTCTTGCA
GAGCTGATTGTGGTTATGGCTTCCCACTGTTACTTGGTTGGTCCTTCTGGAGAGTTGTTC
ATTGAATATCTTGTTCGCCACTCTGCAATGTTTGGTCTGCACAGAGATGATACTGAGAGA
TCCAGGGAATTGAACTCGTCAAATGATGGTTATTACCCTTTTGTGTACAAGAAAATAGAG
ACGAAGATGGAGGTTGGTACACTGTCAGAATTGAGGGCAATCTGTGAAACGGGTCTTCTT
CTAATAACTGTTACTGTCCCTGAGATGGAGCATGTTTTATGGCCATTTTTGTTGAAGATG
ATCATACCACGGGTTTACACGGGTGCAGTTGCCACGGTCTGCAAATGCATATCAGAATTG
TGCAGGCGTAGATCTTCTCAAAGTGGTGCTGGGGTTTTGGAATGTAAAGCTCGTGCTGAT
ATTCCGCATCCTGAGGAGCTTTTTGCACGCCTGCTTGTTCTTCTCCATAATCCTCTGGCT
AGGGAGCAGTTGGCAACCCAGATTCTAACCGTCTTGTGTTATCTGGCACCGCTCTTTCCA
AAGAACATCAACTTGTTTTGGCAAGATGAGATTCCAAAGATGAAGGCATACGTGAGTGAT
ACAGAAGACTTAAAGCAGGATCCTTCATATCAAGAGTCTTGGGATGACATGATTATCAAT
TTTATTGCAGAATCTTTGGATGTAATTCAGGATGTTGACTGGGTTATATCACTTGGAAAT
GCATTTGAAAAGCAATATGAACTTTATAGTCCTGATGACGAGCACTCTGCATTGCTTCAT
CGGTGTCTTGGAATTTTACTGCAGAAGGTTCATGACAGAGCCTATGTTCGCGCTAAGATT
TATCTGATGTATAAACAAGCCAATATTACGATTCCAACAAATAGACTTGGCTTAGCAAAA
GCCATGGGATTGGTGGCTGCATCACACCTAGACACAGTTCTGGATAAGTTGAAAGATATC
CTCGACAATGTTGGGCAAAGTATCTTCCAAAGAATTCTATCATTTTTCTCGGATAGAGGT
AAAATGGAAGAATCTGATGATATCCATGCTGCTTTGGCGCTAATGTATGGATATGCTGCA
AAATATGCTCCCTCAACTGTTATTGAAGCCAGAATAGATGCACTAGTGGGGACCAATGTG
CTGTCACGACTTCTTCATGTCCGCCATCCTACAGCTAAGCAGGCTGTCATCACAGCGATT
GATTTATTAGGTCAGGCAGTGATAAATGCAGCTGAAAGTGGTATATCATTCCCCCTGAAA
AGAAGAGACCAGTTACTTGATTATATATTAACATTAATGGGCAGCGATGAGGGGGATGGA
TTTTCTGAATCCAGCACTGAGCATCTGCGCACTCAGTCGTTTGCTTTAAGTGCCTGCACT
ACTCTGGTTTCCGTAGAGCCAAAACTGACTACTGAAACAAGAAACCTTGTTATGAAGGCC
ACAGTTGGATTTTTTGGCTTGCCTAATGAGCCTGCTGATGTTATCGACCCCCTTATTGGC
AACCTGATTACTCTTCTATGTACAATACTCATTACAAGTGGAGAGGATGGAAGAAGTCGA
GCAGAGCAATTATTGCACATATTGAGAAAGGTCGATCTGTATGTTTCCTCTTCTTTGGAC
TACCAGAGGAAAAGAGGGTGTCTTGCAGCTCATGAGCTACTTTTCAAGTTTCGGATGATC
TGTATCAGTGGATACTGTGCACTAGGATGTCGGGGAACTTGCACCCACAGAGAGAAAACT
GACCGTGCTTTACATCACACCTTATCTAATTTGCCTTCTGCATTTGCTTTACCAAGCCGT
GATGCTTTGCGCTTGGGAGAGCGTACAATGATGTATCTTCCACGATCTGTGGATACAAGT
TCTGAAGTCCGAAAACTTTCTGTTCAGATCCTTCATCTATATTTCAGTATATCTCTATCA
CTTCCAAGGCCTGCAAATTCTGGTTTCAGCAATGACATTGAATCATCCTATAGTGCTTTG
TCTTCCCTTGAGGATGTTATAGCTATTCTACGAAGTGATGCTTCAATTGATCCATCAGAG
GTGTTTAACAGGGTTGTTTCTTCTGTTTGCATCTTGCTGACAAAGGATGAGCTTGCTGCA
GCTTTGCATGGTTGCTCAGGTGCTATATGTGACAAGATCAAGCAATCTGCAGAAGGTGCA
ATCCAAGCAGTTAATGAGTTTGTTACAAAGAGAGGGAATGCACTGAATGAGACAGATATT
GCAAGAACAACACAATCATTGCTCTCAGCAGTAATTCATGTGACTGAGAAGTATTTACGT
CAGGAAGCTCTTGGTGCTATATGTTCCCTTGCGGAGAACACAAGCTCAAGAATTGTTTTC
AACGAAGTTTTAGCTGCTGCAAGAAAGGACATAGCCACAAAAGATATATCTAGATTACGG
GGTGGGTGGCCAATACAGGATGCCTTCCATGTGTTCTCACAACATTCAGTACTTTCATTC
ACGTTTCTGGACCATGTTATGTCTGTCATCAATCAGATGCCTCCTCTTGAAGGGGATCTG
TGTCACGATGAAAGTTCTGGGCATGCAGTTGATAGTATTGTAGACGATAATATTGCAAGA
GCAGCTATTGTTGCTCTTACTGCTTTTTTTAGGGGTGGTGGTAAAGTTGGTAAAAAAGCA
GTTGAGCAAAGTTATGCTTCTGTTCTTGCGACACTAACGCTTCACCTGGGCAGCTGTCAT
GGCTTAGCTAGTACTGGTGAACTAGAACCACTGCGCGCTCTACTGGCTGCATTTCAAGCA
TTCTGTGAATGTGTTGGTGATCTGGAAATGGGAAAGATTCTTGCGCGAGATGGAGAGCAA
AGTGAAAATGAGAAGTGGATCAACCTTATAAGAGATCTGTCTGGCTGCATTTCTATAAAA
AGACCAAAAGAGGTCCCAGACATATGTTTGATACTGAGCAATGCACTGGATCGATCTTTA
AGATTTCAAAGAGAATCAGCTGCTGCAGCTTTGTCGGAGTTCTTACGCTATAGTGACGGC
TTTGGTCCCCTATTAGAGCAGATGGTGCAAGCACTTTGCCGGCATGTATCAGATGATTCT
CCTACTGTTAGGCGCCTTTGTCTAAGAGGGCTTGTCCAGATGCCATCTATCCATGTTCTC
CAGTATACTACTCAAATCCTAGGTGTGATATTAGCTTTGCTCGATGATTCAGATGAGTCA
GTTCAATTAACTGCAGTCTCATGTTTGCTGATGGTTCTTGAGTCTTCATCCAGGGATGCC
GTAGAACCTGTTCTCCTGAACCTTTCCATACGGCTTCGAAATCTGCAAGCGTGCATGAAT
GAGAAGATCCGAGCCAATGCATATGCTGCATTTGGAGCACTGAGCACCTATGGAACTGGG
CCTCAACGAGACTCATTTCTTGAGCAGTTTCATGCTGCTTTCCCACGGATGGTTCTACAT
CTTCATGAGGATGATCTTAGTGTGAGACAAGCTTGCCGAAGCACTTTGAAATGCGTTGCT
CCCTTGATGGAAATTGATGGAATAAATGCTCTTTTGAACACTCATTGGTTTAGTTCGGAC
CACCGAAGCGACTATGAAGACTTTCTCCGAGAGCTTGCAAGGCAACTAACTCAACATCTT
GCTGCCCGAGTTGATACGTACATGGCATCAATAATACAGGCATTTGATGCTCCTTGGCCA
GTTGTCCAGGCAAATGCTGTTTATTTATGTAGCAGCGTGCTTTCTCTCTCCGACGACAAG
CACATATCAGCTCTCTTCTACAATCAGGTTTTCGATATGTTAGTTGGCAAAATGAGTCGT
TCAACGGATGCAATTGTTAGAGCAACTTGTTCTTCAGCCCTAGGCTTGTTGCTCAAATCA
TCCAATGCAAGCTCTTGGAAGGACGTTCGACTTGATCGAGTTGATTCATCGCATAGGGGC
CATGAACCAGAATCCGCTAGGAGATTATGA

Peptide Sequence

PEP ID

XP_016442883.1

PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: protein SHOOT GRAVITROPISM 6-like [Nicotiana tabacum]

Sequence

MASSSSGNSVPAAEAVQVLVSSLADDSPIVREASMATLKDITSLNPLLVLDCCLTVSRGG
RRRFGNIAGLFQVMSVAIQALDKGDVDPNYLAKLAKIATSEVISTKELNADWQRAAAGXL
VSIGSHMPDLMMEEIFLHLSGSNSALPAMVQILAVFASSDALQFTPHLKGVLARVVPILG
NVRDIHRPIFANAFKCWCQSCWQCSVDFPLSSVLDADIMSFLNSAFELLLRVWAISRDLK
VRLSSVEALGQMVGLITRTQLKAALPRLVPTILELYKRDNDVAFVATCSLHNVLSASLLS
ESGPPLLDFEDLTVILSTLLPVVCRSNDKKEHSDFSVGLKTYNEVQHCFLTIGLVYPEDL
FVFLLNKCKLKEEPQAVGALCVLKHLLPRLSEAWHNKRPLLIEVVKLLLDELNLGVCKAL
AELIVVMASHCYLVGPSGELFIEYLVRHSAMFGLHRDDTERSRELNSSNDGYYPFVYKKI
ETKMEVGTLSELRAICETGLLLITVTVPEMEHVLWPFLLKMIIPRVYTGAVATVCKCISE
LCRRRSSQSGAGVLECKARADIPHPEELFARLLVLLHNPLAREQLATQILTVLCYLAPLF
PKNINLFWQDEIPKMKAYVSDTEDLKQDPSYQESWDDMIINFIAESLDVIQDVDWVISLG
NAFEKQYELYSPDDEHSALLHRCLGILLQKVHDRAYVRAKIYLMYKQANITIPTNRLGLA
KAMGLVAASHLDTVLDKLKDILDNVGQSIFQRILSFFSDRGKMEESDDIHAALALMYGYA
AKYAPSTVIEARIDALVGTNVLSRLLHVRHPTAKQAVITAIDLLGQAVINAAESGISFPL
KRRDQLLDYILTLMGSDEGDGFSESSTEHLRTQSFALSACTTLVSVEPKLTTETRNLVMK
ATVGFFGLPNEPADVIDPLIGNLITLLCTILITSGEDGRSRAEQLLHILRKVDLYVSSSL
DYQRKRGCLAAHELLFKFRMICISGYCALGCRGTCTHREKTDRALHHTLSNLPSAFALPS
RDALRLGERTMMYLPRSVDTSSEVRKLSVQILHLYFSISLSLPRPANSGFSNDIESSYSA
LSSLEDVIAILRSDASIDPSEVFNRVVSSVCILLTKDELAAALHGCSGAICDKIKQSAEG
AIQAVNEFVTKRGNALNETDIARTTQSLLSAVIHVTEKYLRQEALGAICSLAENTSSRIV
FNEVLAAARKDIATKDISRLRGGWPIQDAFHVFSQHSVLSFTFLDHVMSVINQMPPLEGD
LCHDESSGHAVDSIVDDNIARAAIVALTAFFRGGGKVGKKAVEQSYASVLATLTLHLGSC
HGLASTGELEPLRALLAAFQAFCECVGDLEMGKILARDGEQSENEKWINLIRDLSGCISI
KRPKEVPDICLILSNALDRSLRFQRESAAAALSEFLRYSDGFGPLLEQMVQALCRHVSDD
SPTVRRLCLRGLVQMPSIHVLQYTTQILGVILALLDDSDESVQLTAVSCLLMVLESSSRD
AVEPVLLNLSIRLRNLQACMNEKIRANAYAAFGALSTYGTGPQRDSFLEQFHAAFPRMVL
HLHEDDLSVRQACRSTLKCVAPLMEIDGINALLNTHWFSSDHRSDYEDFLRELARQLTQH
LAARVDTYMASIIQAFDAPWPVVQANAVYLCSSVLSLSDDKHISALFYNQVFDMLVGKMS
RSTDAIVRATCSSALGLLLKSSNASSWKDVRLDRVDSSHRGHEPESARRL

Transcript Sequence

Gene sequence data has not been registered.